Just thought I would update everyone, I contacted Foxconn as I am sure many others did, and here is what they said:
“Dear Steven:
Thank you for taking the time to make us aware of the situation and also suggestions. Foxconn has no intention to reject Linux. As we all know that Linux is an open source system and there are various flavors available in the market, and that is why we could not perform the specific function tests on every version of Linux. However, we do have tested some Linux systems previously.
As for the Linux issue, our FAE team is working on this issue and hopefully it can be resolved soon. So if you have bought any retail Foxconn motherboards and got this issue please email us your system configuration and problem descriptions. We will be happy to look into it.
Again, we apologize for the inconvenience this may have caused.”
I am satisfied with their response, I don’t believe there is anything to worry about there.